STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_10424Alba domain-containing protein. (454 aa)    
Predicted Functional Partners:
TanjilG_11304
Uncharacterized protein.
    
 0.866
TanjilG_23043
Uncharacterized protein.
    
 0.827
TanjilG_26688
Uncharacterized protein.
     
 0.646
TanjilG_09898
Ribosomal_L7Ae domain-containing protein.
   
 0.634
TanjilG_05853
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.634
TanjilG_24928
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
     
 0.531
TanjilG_00214
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.441
TanjilG_08111
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.441
TanjilG_26342
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.441
TanjilG_13242
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.441
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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