TanjilG_23327 protein (Lupinus angustifolius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TanjilG_23327

NAC domain-containing protein. (366 aa)

Predicted Functional Partners:

TanjilG_08109

0.595

TanjilG_02980

0.552

TanjilG_30079

0.476

TanjilG_07465

0.457

TanjilG_06004

0.455

TanjilG_04411

0.451

TanjilG_01444

0.447

TanjilG_15454

0.447

TanjilG_05292

0.444

TanjilG_31620

0.443

Your Current Organism:

Lupinus angustifolius

NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TanjilG_01444	TanjilG_23327	A0A4P1QVE4	A0A4P1R8X0	DUF641 domain-containing protein.	NAC domain-containing protein.	0.447
TanjilG_02980	TanjilG_08109	A0A4P1RCD8	A0A1J7GK77	ETF domain-containing protein.	Nitroreductase domain-containing protein.	0.527
TanjilG_02980	TanjilG_23327	A0A4P1RCD8	A0A4P1R8X0	ETF domain-containing protein.	NAC domain-containing protein.	0.552
TanjilG_04411	TanjilG_05292	A0A4P1RQF6	A0A4P1QVN4	Phytocyanin domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.449
TanjilG_04411	TanjilG_07465	A0A4P1RQF6	A0A4P1QV89	Phytocyanin domain-containing protein.	Uncharacterized protein.	0.453
TanjilG_04411	TanjilG_15454	A0A4P1RQF6	A0A4P1RLK1	Phytocyanin domain-containing protein.	PlsC domain-containing protein.	0.511
TanjilG_04411	TanjilG_23327	A0A4P1RQF6	A0A4P1R8X0	Phytocyanin domain-containing protein.	NAC domain-containing protein.	0.451
TanjilG_04411	TanjilG_31620	A0A4P1RQF6	A0A1J7HYK4	Phytocyanin domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.415
TanjilG_05292	TanjilG_04411	A0A4P1QVN4	A0A4P1RQF6	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Phytocyanin domain-containing protein.	0.449
TanjilG_05292	TanjilG_06004	A0A4P1QVN4	A0A4P1RE43	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Phytocyanin domain-containing protein.	0.411
TanjilG_05292	TanjilG_07465	A0A4P1QVN4	A0A4P1QV89	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Uncharacterized protein.	0.505
TanjilG_05292	TanjilG_15454	A0A4P1QVN4	A0A4P1RLK1	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	PlsC domain-containing protein.	0.484
TanjilG_05292	TanjilG_23327	A0A4P1QVN4	A0A4P1R8X0	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.444
TanjilG_05292	TanjilG_30079	A0A4P1QVN4	A0A4P1R6V3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Phytocyanin domain-containing protein.	0.435
TanjilG_06004	TanjilG_05292	A0A4P1RE43	A0A4P1QVN4	Phytocyanin domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.411
TanjilG_06004	TanjilG_07465	A0A4P1RE43	A0A4P1QV89	Phytocyanin domain-containing protein.	Uncharacterized protein.	0.460
TanjilG_06004	TanjilG_15454	A0A4P1RE43	A0A4P1RLK1	Phytocyanin domain-containing protein.	PlsC domain-containing protein.	0.486
TanjilG_06004	TanjilG_23327	A0A4P1RE43	A0A4P1R8X0	Phytocyanin domain-containing protein.	NAC domain-containing protein.	0.455
TanjilG_06004	TanjilG_31620	A0A4P1RE43	A0A1J7HYK4	Phytocyanin domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.400
TanjilG_07465	TanjilG_04411	A0A4P1QV89	A0A4P1RQF6	Uncharacterized protein.	Phytocyanin domain-containing protein.	0.453