TanjilG_28253 protein (Lupinus angustifolius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TanjilG_28253

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (295 aa)

Predicted Functional Partners:

TanjilG_24704

0.590

TanjilG_09967

0.553

TanjilG_20452

0.553

TanjilG_18580

0.530

TanjilG_23178

0.530

TanjilG_24969

0.530

TanjilG_14568

0.516

TanjilG_10488

0.510

TanjilG_28262

0.501

TanjilG_12443

0.501

Your Current Organism:

Lupinus angustifolius

NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TanjilG_09967	TanjilG_14568	A0A1J7GDB2	A0A1J7I3S8	MoCF_biosynth domain-containing protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.414
TanjilG_09967	TanjilG_18580	A0A1J7GDB2	A0A394DBD5	MoCF_biosynth domain-containing protein.	Flavokinase domain-containing protein.	0.809
TanjilG_09967	TanjilG_23178	A0A1J7GDB2	A0A394DBY6	MoCF_biosynth domain-containing protein.	Uncharacterized protein.	0.809
TanjilG_09967	TanjilG_24969	A0A1J7GDB2	A0A394DLZ3	MoCF_biosynth domain-containing protein.	Flavokinase domain-containing protein.	0.809
TanjilG_09967	TanjilG_28253	A0A1J7GDB2	A0A4P1RF22	MoCF_biosynth domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.553
TanjilG_10488	TanjilG_12443	A0A4P1R4D6	A0A4P1QZ22	DAO domain-containing protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.911
TanjilG_10488	TanjilG_24704	A0A4P1R4D6	A0A4P1RKB9	DAO domain-containing protein.	Uncharacterized protein.	0.618
TanjilG_10488	TanjilG_28253	A0A4P1R4D6	A0A4P1RF22	DAO domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.510
TanjilG_10488	TanjilG_28262	A0A4P1R4D6	A0A1J7IQH6	DAO domain-containing protein.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.911
TanjilG_12443	TanjilG_10488	A0A4P1QZ22	A0A4P1R4D6	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	DAO domain-containing protein.	0.911
TanjilG_12443	TanjilG_14568	A0A4P1QZ22	A0A1J7I3S8	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.635
TanjilG_12443	TanjilG_24704	A0A4P1QZ22	A0A4P1RKB9	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Uncharacterized protein.	0.848
TanjilG_12443	TanjilG_28253	A0A4P1QZ22	A0A4P1RF22	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.501
TanjilG_12443	TanjilG_28262	A0A4P1QZ22	A0A1J7IQH6	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.900
TanjilG_14568	TanjilG_09967	A0A1J7I3S8	A0A1J7GDB2	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	MoCF_biosynth domain-containing protein.	0.414
TanjilG_14568	TanjilG_12443	A0A1J7I3S8	A0A4P1QZ22	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.635
TanjilG_14568	TanjilG_20452	A0A1J7I3S8	A0A1J7HEM7	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	MoCF_biosynth domain-containing protein.	0.414
TanjilG_14568	TanjilG_28253	A0A1J7I3S8	A0A4P1RF22	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.516
TanjilG_14568	TanjilG_28262	A0A1J7I3S8	A0A1J7IQH6	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	0.635
TanjilG_18580	TanjilG_09967	A0A394DBD5	A0A1J7GDB2	Flavokinase domain-containing protein.	MoCF_biosynth domain-containing protein.	0.809