STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_27699HMG box domain-containing protein. (135 aa)    
Predicted Functional Partners:
TanjilG_12087
Uncharacterized protein.
    
 0.701
TanjilG_07032
Uncharacterized protein.
    
 0.671
TanjilG_21317
Uncharacterized protein.
    
 0.669
TanjilG_18862
Uncharacterized protein; Belongs to the actin family.
    
 0.669
TanjilG_04403
RuvB-like helicase; Belongs to the RuvB family.
    
 0.665
TanjilG_23912
RuvB-like helicase; Belongs to the RuvB family.
    
 0.665
TanjilG_24409
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.654
TanjilG_14749
Uncharacterized protein.
   
 
 0.638
TanjilG_09187
Uncharacterized protein.
    
 0.635
TanjilG_03889
Uncharacterized protein.
    
 0.635
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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