STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_04129Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (605 aa)    
Predicted Functional Partners:
TanjilG_25901
Uncharacterized protein.
   
 0.999
TanjilG_19519
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.999
TanjilG_13032
Uncharacterized protein.
   
 
 0.999
TanjilG_12210
Uncharacterized protein.
   
 
 0.999
TanjilG_31361
DEAD-box ATP-dependent RNA helicase 29.
   
 0.999
TanjilG_23143
CBF domain-containing protein.
   
 
 0.999
TanjilG_08754
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.999
TanjilG_17400
Brix domain-containing protein.
   
 
 0.999
TanjilG_05268
Uncharacterized protein.
   
  
 0.999
TanjilG_28569
Brix domain-containing protein.
   
 
 0.999
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.