STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_08810Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
TanjilG_06403
Uncharacterized protein.
  
     0.541
TanjilG_12235
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.537
TanjilG_32766
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.537
TanjilG_31998
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.536
TanjilG_27998
Uncharacterized protein.
  
     0.536
TanjilG_22591
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.536
TanjilG_21072
Gag_pre-integrs domain-containing protein.
  
     0.534
TanjilG_26660
Uncharacterized protein.
  
     0.532
TanjilG_08735
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.532
TanjilG_18141
Integrase catalytic domain-containing protein.
  
     0.531
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
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