TanjilG_25265 protein (Lupinus angustifolius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TanjilG_25265

Uncharacterized protein. (298 aa)

Predicted Functional Partners:

TanjilG_00185

0.992

TanjilG_26248

0.992

TanjilG_21073

0.991

TanjilG_11807

0.989

TanjilG_12786

0.988

TanjilG_21541

0.985

TanjilG_18324

0.982

TanjilG_32131

0.982

TanjilG_04400

0.982

TanjilG_31824

0.980

Your Current Organism:

Lupinus angustifolius

NCBI taxonomy Id: 3871
Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TanjilG_00185	TanjilG_04400	A0A394D1T7	A0A4P1RQ31	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	0.996
TanjilG_00185	TanjilG_11807	A0A394D1T7	A0A4P1R674	Uncharacterized protein.	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	0.994
TanjilG_00185	TanjilG_12786	A0A394D1T7	A0A1J7GE15	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.998
TanjilG_00185	TanjilG_18324	A0A394D1T7	A0A1J7H242	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.959
TanjilG_00185	TanjilG_21073	A0A394D1T7	A0A1J7I219	Uncharacterized protein.	Uncharacterized protein.	0.999
TanjilG_00185	TanjilG_21541	A0A394D1T7	A0A4P1QUB2	Uncharacterized protein.	Uncharacterized protein.	0.994
TanjilG_00185	TanjilG_25265	A0A394D1T7	A0A4P1RV14	Uncharacterized protein.	Uncharacterized protein.	0.992
TanjilG_00185	TanjilG_26248	A0A394D1T7	A0A4P1R2B7	Uncharacterized protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.998
TanjilG_00185	TanjilG_31824	A0A394D1T7	A0A1J7HM00	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.992
TanjilG_00185	TanjilG_32131	A0A394D1T7	A0A394DDP2	Uncharacterized protein.	Uncharacterized protein.	0.996
TanjilG_04400	TanjilG_00185	A0A4P1RQ31	A0A394D1T7	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.996
TanjilG_04400	TanjilG_11807	A0A4P1RQ31	A0A4P1R674	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.	0.989
TanjilG_04400	TanjilG_12786	A0A4P1RQ31	A0A1J7GE15	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.992
TanjilG_04400	TanjilG_18324	A0A4P1RQ31	A0A1J7H242	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Ribosomal_L18e/L15P domain-containing protein.	0.932
TanjilG_04400	TanjilG_21073	A0A4P1RQ31	A0A1J7I219	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.994
TanjilG_04400	TanjilG_21541	A0A4P1RQ31	A0A4P1QUB2	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.981
TanjilG_04400	TanjilG_25265	A0A4P1RQ31	A0A4P1RV14	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.982
TanjilG_04400	TanjilG_26248	A0A4P1RQ31	A0A4P1R2B7	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.994
TanjilG_04400	TanjilG_31824	A0A4P1RQ31	A0A1J7HM00	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.968
TanjilG_04400	TanjilG_32131	A0A4P1RQ31	A0A394DDP2	Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.	Uncharacterized protein.	0.900