Genes that are sometimes fused into single open reading frames.
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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TanjilG_20396
Uncharacterized protein. (386 aa)
Predicted Functional Partners:
TanjilG_32046
Trehalase.
0.523
TanjilG_15767
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
0.436
Your Current Organism:
Lupinus angustifolius
NCBI taxonomy Id: 3871 Other names: L. angustifolius, Lupinus angustifolius L., narrow-leaved blue lupine
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1
node2
node1 accession
node2 accession
node1 annotation
node2 annotation
score
TanjilG_15767
TanjilG_20396
A0A1J7HW20
A0A4P1RWD4
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
Uncharacterized protein.
0.436
TanjilG_20396
TanjilG_15767
A0A4P1RWD4
A0A1J7HW20
Uncharacterized protein.
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
0.436
TanjilG_20396
TanjilG_32046
A0A4P1RWD4
A0A4P1RF53
Uncharacterized protein.
Trehalase.
0.523
TanjilG_32046
TanjilG_20396
A0A4P1RF53
A0A4P1RWD4
Trehalase.
Uncharacterized protein.
0.523
Network Stats
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Functional enrichments in your networkNote: some enrichments may be expected here (why?) disable highlightexplain columns
Enrichment analysis is still ongoing, please wait ...
Statistical background
For the above enrichment analysis, the following statistical background is assumed: