STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0147Transcriptional regulator. (335 aa)    
Predicted Functional Partners:
LVIS_0109
Transcriptional regulator, LacI family.
  
     0.774
LVIS_0444
Transcriptional regulator, LacI family.
  
     0.770
LVIS_0145
Transcriptional regulator, GntR family.
 
   
 0.667
LVIS_0356
Transcriptional regulator, LacI family.
 
  
0.667
LVIS_0149
Hypothetical protein.
 
     0.646
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
     
 0.567
LVIS_0148
Na+/xyloside symporter related transporter.
 
     0.560
LVIS_0765
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.441
LVIS_1552
Phosphotransferase system, HPr-related protein.
   
 
 0.427
LVIS_0152
Uncharacterized protein containing NRPS condensation (elongation) domain.
  
 
   0.419
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.