STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0177ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily. (324 aa)    
Predicted Functional Partners:
LVIS_0175
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.999
LVIS_0176
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.998
LVIS_0178
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
0.990
LVIS_0174
ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.989
LVIS_1767
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
 0.985
LVIS_2197
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
   
0.897
LVIS_1768
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
 0.896
pstB-2
ABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.894
pstB-3
ABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.878
LVIS_1766
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
0.590
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.