STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0180Lipoate-protein ligase. (337 aa)    
Predicted Functional Partners:
LVIS_0483
Lipoate-protein ligase A.
 
  
 0.924
LVIS_1950
Lipoate-protein ligase A.
  
  
 
0.918
LVIS_1647
Lipoate-protein ligase.
  
  
 
0.903
LVIS_0609
Acyl-ACP thioesterase.
     
  0.900
LVIS_1407
Dihydrolipoamide dehydrogenase.
 
 
 0.755
LVIS_1408
Acetoin/pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
 
 0.684
LVIS_0181
Hypothetical protein.
  
    0.540
LVIS_1409
Acetoin dehydrogenase complex, E1 component, beta subunit.
 
 0.536
LVIS_0182
Hypothetical protein.
  
    0.528
pdhA
Acetoin dehydrogenase complex, E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
 
 
 0.456
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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