STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0309Trehalose-6-phosphate hydrolase. (545 aa)    
Predicted Functional Partners:
LVIS_1758
Alpha-galactosidase.
  
 
 0.927
LVIS_0465
Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.919
LVIS_0358
Maltose phosphorylase.
  
 
 0.918
LVIS_1961
Beta-glucosidase-related glycosidase.
   
 
 0.918
LVIS_0137
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.912
LVIS_2163
Fructokinase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase.
  
 
 0.910
LVIS_2254
ABC-type maltose transport system, permease component.
 
  
 0.431
LVIS_0308
ABC-type antimicrobial peptide transport system, ATPase component.
  
    0.426
LVIS_0310
Transcriptional regulator.
       0.413
LVIS_0307
ABC-type antimicrobial peptide transport system, permease component.
       0.411
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.