Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LVIS_0285 | LVIS_0310 | Transcriptional regulator. | Transcriptional regulator. | 0.536 |
LVIS_0285 | LVIS_0713 | Transcriptional regulator. | Hypothetical protein. | 0.443 |
LVIS_0304 | LVIS_0310 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Transcriptional regulator. | 0.534 |
LVIS_0304 | LVIS_1381 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Hypothetical protein. | 0.575 |
LVIS_0304 | LVIS_2300 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Uncharacterized protein containing NRPS condensation (elongation) domain. | 0.752 |
LVIS_0307 | LVIS_0308 | ABC-type antimicrobial peptide transport system, permease component. | ABC-type antimicrobial peptide transport system, ATPase component. | 0.986 |
LVIS_0307 | LVIS_0310 | ABC-type antimicrobial peptide transport system, permease component. | Transcriptional regulator. | 0.690 |
LVIS_0307 | LVIS_0713 | ABC-type antimicrobial peptide transport system, permease component. | Hypothetical protein. | 0.525 |
LVIS_0308 | LVIS_0307 | ABC-type antimicrobial peptide transport system, ATPase component. | ABC-type antimicrobial peptide transport system, permease component. | 0.986 |
LVIS_0308 | LVIS_0310 | ABC-type antimicrobial peptide transport system, ATPase component. | Transcriptional regulator. | 0.531 |
LVIS_0310 | LVIS_0285 | Transcriptional regulator. | Transcriptional regulator. | 0.536 |
LVIS_0310 | LVIS_0304 | Transcriptional regulator. | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | 0.534 |
LVIS_0310 | LVIS_0307 | Transcriptional regulator. | ABC-type antimicrobial peptide transport system, permease component. | 0.690 |
LVIS_0310 | LVIS_0308 | Transcriptional regulator. | ABC-type antimicrobial peptide transport system, ATPase component. | 0.531 |
LVIS_0310 | LVIS_0707 | Transcriptional regulator. | Transcriptional regulator. | 0.616 |
LVIS_0310 | LVIS_0713 | Transcriptional regulator. | Hypothetical protein. | 0.514 |
LVIS_0310 | LVIS_1381 | Transcriptional regulator. | Hypothetical protein. | 0.490 |
LVIS_0310 | LVIS_1568 | Transcriptional regulator. | Hypothetical protein. | 0.634 |
LVIS_0310 | LVIS_1583 | Transcriptional regulator. | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | 0.481 |
LVIS_0310 | LVIS_2300 | Transcriptional regulator. | Uncharacterized protein containing NRPS condensation (elongation) domain. | 0.611 |
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