STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0451Hypothetical protein. (321 aa)    
Predicted Functional Partners:
LVIS_0452
NAD-dependent protein deacetylase, SIR2 family.
  
  
 0.836
LVIS_0450
Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
  
    0.819
LVIS_0449
Exopolyphosphatase.
 
     0.787
LVIS_0454
Hypothetical protein.
 
     0.774
LVIS_2117
Predicted SAM-dependent methyltransferase.
  
     0.712
LVIS_0695
Hypothetical protein.
  
     0.706
LVIS_1432
TPR repeat protein.
  
     0.694
LVIS_0448
tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.689
LVIS_0453
Hypothetical protein.
       0.676
LVIS_1949
Hypothetical protein.
  
     0.674
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.