STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0499Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (156 aa)    
Predicted Functional Partners:
LVIS_0731
Fructosamine-3-kinase.
 
     0.547
LVIS_0500
Hypothetical protein.
       0.535
htpX
HtpX-2 peptidase. Metallo peptidase. MEROPS family M48B; Belongs to the peptidase M48B family.
       0.534
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.461
LVIS_1572
Ribonuclease BN-like family enzyme; Belongs to the UPF0761 family.
  
  
 0.454
LVIS_0502
Hypothetical protein.
       0.416
LVIS_1653
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.413
LVIS_0334
Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family.
  
 
 0.410
LVIS_0405
Arylsulfate sulfotransferase.
  
 
 0.410
LVIS_1216
Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family.
  
 
 0.410
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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