STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0502Hypothetical protein. (261 aa)    
Predicted Functional Partners:
LVIS_1867
Hypothetical protein.
  
     0.744
LVIS_1835
Hypothetical protein.
  
     0.721
LVIS_1931
Hypothetical protein.
  
     0.672
LVIS_1219
Stimulator of FtsZ polymerization and component of cell-division Z-ring.
  
     0.661
LVIS_1346
Hypothetical protein.
  
     0.655
LVIS_1521
Hypothetical protein.
  
     0.626
LVIS_0500
Hypothetical protein.
  
    0.611
LVIS_0236
Hypothetical protein.
  
     0.610
LVIS_2060
Uncharacterized membrane-bound protein conserved in bacteria.
  
     0.608
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
       0.604
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.