STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_0697Cell surface protein. (396 aa)    
Predicted Functional Partners:
LVIS_0698
Cell surface protein.
 
   
 0.950
LVIS_0699
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
  
 0.935
LVIS_0700
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.916
LVIS_0701
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component.
 
     0.904
LVIS_1381
Hypothetical protein.
  
     0.730
LVIS_1362
Hypothetical protein.
  
     0.708
LVIS_0026
Predicted Zn-dependent protease.
 
     0.699
LVIS_0181
Hypothetical protein.
  
     0.650
LVIS_2183
Hypothetical protein.
  
     0.645
LVIS_0490
Transcriptional regulator.
  
     0.616
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.