Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pepTPeptidase T. Metallo peptidase. MEROPS family M20B; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (413 aa)    
Predicted Functional Partners:
LVIS_0760
Hypothetical protein.
  
    0.789
pepX
Xaa-Pro dipeptidyl-peptidase. Serine peptidase. MEROPS family S15; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family.
      
 0.762
LVIS_0982
Aminopeptidase P; Belongs to the peptidase M24B family.
  
 
 0.740
LVIS_1204
Mername-AA019 peptidase. Metallo peptidase. MEROPS family M24B.
  
 
 0.739
LVIS_0759
Predicted SAM-dependent methyltransferase.
  
    0.686
LVIS_1476
Oligopeptidase F. Metallo peptidase. MEROPS family M03B.
   
  
 0.635
LVIS_1891
Neutral endopeptidase.
   
  
 0.632
LVIS_1756
Lysyl aminopeptidase. Metallo peptidase. MEROPS family M01.
      
 0.628
clpB
ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
  
 0.574
LVIS_0534
Dipeptide/tripeptide permease.
      
 0.559
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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