Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LVIS_0852 | LVIS_0871 | Rhodanese-related sulfurtransferase. | Transcriptional regulator. | 0.668 |
LVIS_0870 | LVIS_0871 | Hypothetical protein. | Transcriptional regulator. | 0.919 |
LVIS_0870 | LVIS_0872 | Hypothetical protein. | Transcriptional regulator, MerR family. | 0.565 |
LVIS_0871 | LVIS_0852 | Transcriptional regulator. | Rhodanese-related sulfurtransferase. | 0.668 |
LVIS_0871 | LVIS_0870 | Transcriptional regulator. | Hypothetical protein. | 0.919 |
LVIS_0871 | LVIS_0872 | Transcriptional regulator. | Transcriptional regulator, MerR family. | 0.568 |
LVIS_0871 | LVIS_0918 | Transcriptional regulator. | Response regulator of the LytR/AlgR family. | 0.424 |
LVIS_0871 | LVIS_1101 | Transcriptional regulator. | Phage Mu protein F like protein. | 0.432 |
LVIS_0871 | LVIS_1997 | Transcriptional regulator. | Predicted permease. | 0.417 |
LVIS_0871 | LVIS_2034 | Transcriptional regulator. | Uncharacterized conserved membrane protein. | 0.454 |
LVIS_0872 | LVIS_0870 | Transcriptional regulator, MerR family. | Hypothetical protein. | 0.565 |
LVIS_0872 | LVIS_0871 | Transcriptional regulator, MerR family. | Transcriptional regulator. | 0.568 |
LVIS_0918 | LVIS_0871 | Response regulator of the LytR/AlgR family. | Transcriptional regulator. | 0.424 |
LVIS_1101 | LVIS_0871 | Phage Mu protein F like protein. | Transcriptional regulator. | 0.432 |
LVIS_1997 | LVIS_0871 | Predicted permease. | Transcriptional regulator. | 0.417 |
LVIS_2034 | LVIS_0871 | Uncharacterized conserved membrane protein. | Transcriptional regulator. | 0.454 |