Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LVIS_0393 | LVIS_1072 | Hypothetical protein. | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | 0.577 |
LVIS_0393 | LVIS_1105 | Hypothetical protein. | Hypothetical protein. | 0.502 |
LVIS_0393 | LVIS_1146 | Hypothetical protein. | Integrase; Belongs to the 'phage' integrase family. | 0.665 |
LVIS_0393 | LVIS_2192 | Hypothetical protein. | Predicted hydrolase (HAD superfamily). | 0.506 |
LVIS_0917 | LVIS_1146 | Hypothetical protein. | Integrase; Belongs to the 'phage' integrase family. | 0.544 |
LVIS_1072 | LVIS_0393 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Hypothetical protein. | 0.577 |
LVIS_1072 | LVIS_1088 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | SLT domain protein. | 0.874 |
LVIS_1072 | LVIS_1098 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Hypothetical protein. | 0.452 |
LVIS_1072 | LVIS_1101 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Phage Mu protein F like protein. | 0.773 |
LVIS_1072 | LVIS_1102 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Phage portal protein, SPP1 Gp6-like. | 0.578 |
LVIS_1072 | LVIS_1105 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Hypothetical protein. | 0.651 |
LVIS_1072 | LVIS_1146 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Integrase; Belongs to the 'phage' integrase family. | 0.698 |
LVIS_1072 | LVIS_1974 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Hypothetical protein. | 0.440 |
LVIS_1088 | LVIS_1072 | SLT domain protein. | Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | 0.874 |
LVIS_1088 | LVIS_1098 | SLT domain protein. | Hypothetical protein. | 0.767 |
LVIS_1088 | LVIS_1101 | SLT domain protein. | Phage Mu protein F like protein. | 0.795 |
LVIS_1088 | LVIS_1102 | SLT domain protein. | Phage portal protein, SPP1 Gp6-like. | 0.786 |
LVIS_1088 | LVIS_1105 | SLT domain protein. | Hypothetical protein. | 0.717 |
LVIS_1088 | LVIS_1146 | SLT domain protein. | Integrase; Belongs to the 'phage' integrase family. | 0.496 |
LVIS_1088 | LVIS_1974 | SLT domain protein. | Hypothetical protein. | 0.427 |
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