STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1215Predicted hydrocarbon binding protein, V4R domain. (174 aa)    
Predicted Functional Partners:
LVIS_1211
CBS domain containing protein.
 
     0.708
LVIS_1632
Hypothetical protein.
  
     0.681
LVIS_1212
Predicted phosphoesterase.
       0.639
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.639
LVIS_0630
Trypsin-like serine protease with PDZ domain.
  
     0.635
LVIS_0768
RibT protein, riboflavin biosynthesis acetyltransferase (GNAT) family.
  
     0.612
LVIS_1546
Phosphoglycerol transferase related protein, alkaline phosphatase superfamily.
  
     0.605
LVIS_1213
Xanthosine triphosphate pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.593
LVIS_0780
TPR repeat protein.
  
     0.569
LVIS_1364
Polyphosphate:AMP phosphotransferase.
   
    0.493
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.