STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1600Propanediol utilization protein. (114 aa)    
Predicted Functional Partners:
LVIS_1606
Propanediol utilization protein; Similar to carboxysome shell protein CcmL.
 
   
 0.806
pduL
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
   
 0.782
LVIS_1610
Propanediol utilization protein; Similar to carboxysome shell protein CcmK.
 
  
 0.779
ackA-3
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
    0.753
LVIS_1609
Propanediol utilization protein; Similar to carboxysome shell protein CcmK.
 
  
 0.752
LVIS_1599
NADH:flavin oxidoreductase, Old Yellow Enzyme family.
       0.732
LVIS_1617
Propanediol utilization protein; Similar to carboxysome shell protein CcmK.
 
  
 0.726
LVIS_1598
Protein tyrosine/serine phosphatase.
       0.707
LVIS_1604
ATP:cob(I)alamin adenosyltransferase.
 
   
 0.664
LVIS_1979
Ethanolamine utilisation protein EutN.
 
   
 0.637
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.