STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1613Propanediol dehydratase, small subunit. (175 aa)    
Predicted Functional Partners:
LVIS_1614
Diol Dehydratase medium subunit.
 
 0.999
LVIS_1615
Propanediol dehydratase, large subunit.
 
 0.999
LVIS_1611
Diol Dehydratase medium subunit.
 
 
 0.997
LVIS_1603
CoA-dependent propionaldehyde dehydrogenase.
 
 
 0.978
LVIS_1616
Propanediol utilization protein.
 
  
 0.963
LVIS_1612
Propanediol utilization ATPase.
 
  
 0.959
LVIS_1602
NADPH-dependent 1,3-propanediol dehydrogenase.
  
 
 0.956
LVIS_1604
ATP:cob(I)alamin adenosyltransferase.
 
   
 0.914
LVIS_2191
1,3-propanediol dehydrogenase.
  
 
 0.905
LVIS_2165
Glycerol dehydrogenase.
    
  0.904
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.