STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1639Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component. (579 aa)    
Predicted Functional Partners:
LVIS_1642
Cytochrome bd-type quinol oxidase, subunit 1.
  
 0.967
LVIS_1641
Cytochrome bd-type quinol oxidase, subunit 2.
 
  
 0.939
LVIS_0256
ABC-type proline/glycine betaine transport system, ATPase component.
 
     
0.899
LVIS_1775
ABC-type polar amino acid transport system, ATPase component.
 
     
0.899
pstB-3
ABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.896
potA
ABC-type spermidine/putrescine transport system, ATPase component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.895
LVIS_2102
ABC-type uncharacterized transport system, ATPase component.
 
     
0.889
LVIS_1637
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.787
LVIS_0320
NADH dehydrogenase, FAD-containing subunit.
 
   
 0.762
LVIS_1638
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
     0.749
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.