STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1776Hypothetical protein. (310 aa)    
Predicted Functional Partners:
LVIS_1777
Hypothetical protein.
 
    0.940
LVIS_1412
Hypothetical protein.
  
     0.712
LVIS_0827
Transcriptional regulator, MarR family.
  
     0.661
LVIS_1778
Fe2+/Zn2+ uptake regulation protein; Belongs to the Fur family.
       0.660
mprF-2
Predicted integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
     0.650
LVIS_0672
Hypothetical protein.
  
     0.627
LVIS_2279
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase of PMT family.
  
     0.589
LVIS_1150
Monooxygenase.
  
     0.574
LVIS_1931
Hypothetical protein.
  
     0.554
LVIS_1311
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase of PMT family.
  
     0.521
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.