STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1849Hypothetical protein. (426 aa)    
Predicted Functional Partners:
LVIS_1852
ATP-utilizing enzyme of the PP-loop superfamily.
 
  
 0.977
LVIS_1850
NCAIR mutase (PurE)-related protein.
 
  
 0.972
larC
Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.968
LVIS_1848
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase.
 
  
 0.960
ldh
Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate.
     
 0.932
LVIS_1406
Malate/lactate dehydrogenase.
     
 0.915
LVIS_0201
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.911
LVIS_1352
Lactate dehydrogenase related 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.911
LVIS_2203
Malolactic enzyme.
    
  0.907
LVIS_1853
Glycerol uptake facilitator related permease (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.791
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.