Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LVIS_1367 | LVIS_1853 | LVIS_1367 | LVIS_1853 | Nucleoside diphosphate kinase; Belongs to the NDK family. | Glycerol uptake facilitator related permease (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.463 |
LVIS_1848 | LVIS_1849 | LVIS_1848 | LVIS_1849 | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Hypothetical protein. | 0.960 |
LVIS_1848 | LVIS_1850 | LVIS_1848 | LVIS_1850 | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | NCAIR mutase (PurE)-related protein. | 0.840 |
LVIS_1848 | LVIS_1852 | LVIS_1848 | LVIS_1852 | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | ATP-utilizing enzyme of the PP-loop superfamily. | 0.894 |
LVIS_1848 | LVIS_1853 | LVIS_1848 | LVIS_1853 | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Glycerol uptake facilitator related permease (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.647 |
LVIS_1848 | LVIS_1854 | LVIS_1848 | LVIS_1854 | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | High-affinity nickel permease; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.595 |
LVIS_1848 | larC | LVIS_1848 | LVIS_1851 | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.872 |
LVIS_1849 | LVIS_1848 | LVIS_1849 | LVIS_1848 | Hypothetical protein. | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | 0.960 |
LVIS_1849 | LVIS_1850 | LVIS_1849 | LVIS_1850 | Hypothetical protein. | NCAIR mutase (PurE)-related protein. | 0.972 |
LVIS_1849 | LVIS_1852 | LVIS_1849 | LVIS_1852 | Hypothetical protein. | ATP-utilizing enzyme of the PP-loop superfamily. | 0.977 |
LVIS_1849 | LVIS_1853 | LVIS_1849 | LVIS_1853 | Hypothetical protein. | Glycerol uptake facilitator related permease (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.791 |
LVIS_1849 | LVIS_1854 | LVIS_1849 | LVIS_1854 | Hypothetical protein. | High-affinity nickel permease; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.654 |
LVIS_1849 | larC | LVIS_1849 | LVIS_1851 | Hypothetical protein. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.968 |
LVIS_1850 | LVIS_1848 | LVIS_1850 | LVIS_1848 | NCAIR mutase (PurE)-related protein. | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | 0.840 |
LVIS_1850 | LVIS_1849 | LVIS_1850 | LVIS_1849 | NCAIR mutase (PurE)-related protein. | Hypothetical protein. | 0.972 |
LVIS_1850 | LVIS_1852 | LVIS_1850 | LVIS_1852 | NCAIR mutase (PurE)-related protein. | ATP-utilizing enzyme of the PP-loop superfamily. | 0.995 |
LVIS_1850 | LVIS_1853 | LVIS_1850 | LVIS_1853 | NCAIR mutase (PurE)-related protein. | Glycerol uptake facilitator related permease (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.790 |
LVIS_1850 | LVIS_1854 | LVIS_1850 | LVIS_1854 | NCAIR mutase (PurE)-related protein. | High-affinity nickel permease; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.580 |
LVIS_1850 | larC | LVIS_1850 | LVIS_1851 | NCAIR mutase (PurE)-related protein. | Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family. | 0.986 |
LVIS_1852 | LVIS_1848 | LVIS_1852 | LVIS_1848 | ATP-utilizing enzyme of the PP-loop superfamily. | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. | 0.894 |
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