STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAABC-type spermidine/putrescine transport system, ATPase component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (370 aa)    
Predicted Functional Partners:
LVIS_1860
Spermidine/putrescine ABC transporter permease protein.
 0.999
LVIS_1862
Spermidine/putrescine-binding periplasmic protein.
 
 0.999
LVIS_1861
Spermidine/putrescine ABC transporter permease protein.
 
 
 0.997
LVIS_1296
ABC-type multidrug transport system, ATPase and permease component.
 
 
   
0.900
LVIS_1356
ABC-type multidrug transport system, ATPase and permease component.
 
 
   
0.900
LVIS_1639
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component.
 
     
0.895
LVIS_0132
ABC-type multidrug transport system, ATPase component.
 
 
   
0.809
LVIS_1839
ABC-type uncharacterized transport system, ATPase component.
     
0.769
LVIS_1481
ABC-type multidrug transport system, ATPase component.
 
   
0.742
LVIS_1995
ABC-type multidrug transport system, ATPase and permease component.
 
 
   
0.719
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.