STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_1901Transcriptional regulator, LacI family. (336 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridyltransferase.
 
  
 0.956
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.949
LVIS_1903
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.851
LVIS_0109
Transcriptional regulator, LacI family.
  
     0.748
LVIS_0356
Transcriptional regulator, LacI family.
  
     0.725
LVIS_1744
Transcriptional regulator, GntR family.
  
     0.679
LVIS_1908
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose; Belongs to the aldose epimerase family.
 
   
 0.659
LVIS_2259
Beta-galactosidase.
     
 0.566
LVIS_1422
Transcriptional regulator, LacI family.
  
   
0.510
LVIS_1905
Na+/xyloside symporter related transporter.
 
     0.488
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.