STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LVIS_2198ABC-type antimicrobial peptide transport system, permease component. (352 aa)    
Predicted Functional Partners:
LVIS_2197
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.974
LVIS_2199
Transcriptional regulator.
 
    0.946
LVIS_0889
ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.583
LVIS_0308
ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.581
LVIS_0387
ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.573
LVIS_2200
Permease of the major facilitator superfamily.
       0.486
LVIS_1886
Predicted multitransmembrane protein.
 
     0.426
LVIS_1885
Predicted multitransmembrane protein.
 
     0.408
Your Current Organism:
Lactobacillus brevis
NCBI taxonomy Id: 387344
Other names: L. brevis ATCC 367, Lactobacillus brevis ATCC 367, Lactobacillus brevis str. ATCC 367, Lactobacillus brevis strain ATCC 367
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.