STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK60172.1Riboflavin synthase alpha chain; PF00885:TIGR01506:COG1731; PFAM: 6,7-dimethyl-8-ribityllumazinesynthase; COG: Archaeal riboflavin synthase; TIGR: riboflavin synthase. (153 aa)    
Predicted Functional Partners:
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
  
  0.985
ribK
CTP-dependent riboflavin kinase; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
    
  0.925
AGK60173.1
L-aspartate aminotransferase apoenzyme; PF00266:COG0075; PFAM: Aminotransferaseclass-V; COG: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
       0.882
AGK62039.1
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
 
   
 0.699
AGK61429.1
Hypothetical protein.
 
     0.671
AGK60169.1
Hypothetical protein; PF02683:COG4232; PFAM: CytochromeCbiogenesisproteintransmembraneregion; COG: Thiol:disulfide interchange protein.
 
     0.609
AGK60168.1
Putative membrane-associated protein/domain protein; PF13412:COG2512; PFAM: Wingedhelix-turn-helixDNA-binding; COG: Uncharacterized membrane-associated protein/domain.
 
     0.598
AGK60170.1
PF00155:COG0436; PFAM: AminotransferaseclassIandII; COG: Aspartate/tyrosine/aromatic aminotransferase.
       0.587
AGK61874.1
Hydrogenase maturation factor; PF02769:COG1973; PFAM: AIRsynthaserelatedprotein,C-terminaldomain; COG: Hydrogenase maturation factor.
  
     0.551
AGK61050.1
Putative pyrophosphatase; PF03819:COG1694; PFAM: MazGnucleotidepyrophosphohydrolasedomain; COG: Predicted pyrophosphatase.
  
     0.500
Your Current Organism:
Archaeoglobus sulfaticallidus
NCBI taxonomy Id: 387631
Other names: A. sulfaticallidus PM70-1, Archaeoglobus sp. PM70-1, Archaeoglobus sulfaticallidus PM70-1
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