Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CRP_042 | CRP_043 | aspartyl/glutamyl-tRNA amidotransferase B subunit. | aspartyl/glutamyl-tRNA amidotransferase A subunit. | 0.999 |
CRP_042 | CRP_044 | aspartyl/glutamyl-tRNA amidotransferase B subunit. | Hypothetical protein. | 0.773 |
CRP_042 | CRP_045 | aspartyl/glutamyl-tRNA amidotransferase B subunit. | Ribosomal protein L13. | 0.548 |
CRP_042 | CRP_046 | aspartyl/glutamyl-tRNA amidotransferase B subunit. | Ribosomal protein S9. | 0.560 |
CRP_043 | CRP_042 | aspartyl/glutamyl-tRNA amidotransferase A subunit. | aspartyl/glutamyl-tRNA amidotransferase B subunit. | 0.999 |
CRP_043 | CRP_044 | aspartyl/glutamyl-tRNA amidotransferase A subunit. | Hypothetical protein. | 0.773 |
CRP_043 | CRP_045 | aspartyl/glutamyl-tRNA amidotransferase A subunit. | Ribosomal protein L13. | 0.548 |
CRP_043 | CRP_046 | aspartyl/glutamyl-tRNA amidotransferase A subunit. | Ribosomal protein S9. | 0.590 |
CRP_043 | CRP_050 | aspartyl/glutamyl-tRNA amidotransferase A subunit. | Putative ribosomal protein S1. | 0.440 |
CRP_044 | CRP_042 | Hypothetical protein. | aspartyl/glutamyl-tRNA amidotransferase B subunit. | 0.773 |
CRP_044 | CRP_043 | Hypothetical protein. | aspartyl/glutamyl-tRNA amidotransferase A subunit. | 0.773 |
CRP_044 | CRP_045 | Hypothetical protein. | Ribosomal protein L13. | 0.548 |
CRP_044 | CRP_046 | Hypothetical protein. | Ribosomal protein S9. | 0.548 |
CRP_045 | CRP_042 | Ribosomal protein L13. | aspartyl/glutamyl-tRNA amidotransferase B subunit. | 0.548 |
CRP_045 | CRP_043 | Ribosomal protein L13. | aspartyl/glutamyl-tRNA amidotransferase A subunit. | 0.548 |
CRP_045 | CRP_044 | Ribosomal protein L13. | Hypothetical protein. | 0.548 |
CRP_045 | CRP_046 | Ribosomal protein L13. | Ribosomal protein S9. | 0.773 |
CRP_045 | CRP_047 | Ribosomal protein L13. | Hypothetical protein. | 0.501 |
CRP_045 | CRP_048 | Ribosomal protein L13. | Hypothetical protein. | 0.501 |
CRP_045 | CRP_049 | Ribosomal protein L13. | 3-phosphoshikimate 1-carboxyvinyltransferase. | 0.501 |
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