STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A15Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (729 aa)    
Predicted Functional Partners:
STX4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.605
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
    
 0.605
STX1B
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.605
STX2
Syntaxin 2; Belongs to the syntaxin family.
    
 0.605
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.605
STX11
Syntaxin 11.
    
 0.592
XIRP2
Xin actin binding repeat containing 2.
    
 0.558
ENSGAGP00000027066
t-SNARE coiled-coil homology domain-containing protein.
    
 0.558
SLC1A6
Amino acid transporter.
    
 0.509
SLC1A3
Amino acid transporter.
    
 0.508
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.