STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000000758Histone H2B; Belongs to the histone H2B family. (126 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.926
ENSGAGP00000023451
Uncharacterized protein.
    
 0.889
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.855
MACROH2A2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
 0.842
MACROH2A1
H2A histone family member Y; Belongs to the histone H2A family.
   
 0.842
ENSGAGP00000009643
Histone H2A; Belongs to the histone H2A family.
  
 0.833
POLR2C
RNA polymerase II subunit C.
    
 0.833
ENSGAGP00000036283
Histone H2A; Belongs to the histone H2A family.
 
 0.833
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.832
ENSGAGP00000000633
Histone H2A; Belongs to the histone H2A family.
 
 0.831
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.