STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000002968Uncharacterized protein. (518 aa)    
Predicted Functional Partners:
ENSGAGP00000002625
Ig-like domain-containing protein.
    
  0.522
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.522
CD47
CD47 molecule.
    
  0.499
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
  0.472
ENSGAGP00000009473
Uncharacterized protein.
    
  0.470
ENSGAGP00000019495
Ig-like domain-containing protein.
    
  0.470
ENSGAGP00000031849
Uncharacterized protein.
    
  0.470
NECTIN1
Nectin cell adhesion molecule 1.
    
  0.470
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.457
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
  0.455
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.