STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCFC2Host cell factor C2. (799 aa)    
Predicted Functional Partners:
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 0.955
ENSGAGP00000027093
TPR_REGION domain-containing protein.
   
 0.921
BAP1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.910
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.901
WDR5B
WD repeat domain 5B.
    
 0.877
MCRS1
Microspherule protein 1.
    
 0.837
ENSGAGP00000003720
Deacetylase sirtuin-type domain-containing protein.
    
 0.833
WSB2
WD repeat and SOCS box containing 2.
    
 0.831
UCHL5
Ubiquitin carboxyl-terminal hydrolase.
    
 0.831
WSB1
WD repeat and SOCS box containing 1.
    
 0.831
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.