STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1HMyosin IH; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1012 aa)    
Predicted Functional Partners:
USH1G
USH1 protein network component sans.
   
 0.744
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.744
USH1C
USH1 protein network component harmonin.
    
 0.707
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
    
 0.694
ENSGAGP00000024476
PDZ domain-containing protein.
    
 0.661
WHRN
Whirlin.
    
 0.661
MYL2
Myosin light chain 2.
    
 0.603
ENSGAGP00000023355
Uncharacterized protein.
    
 0.603
ENSGAGP00000028715
Uncharacterized protein.
    
 0.603
ENSGAGP00000010109
Uncharacterized protein.
    
 0.598
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.