STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000006355Ig-like domain-containing protein. (258 aa)    
Predicted Functional Partners:
ENSGAGP00000022665
Ig-like domain-containing protein.
   
0.930
CD74
CD74 molecule.
   
 0.907
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
  
0.884
ENSGAGP00000006365
Ig-like domain-containing protein.
   
 
0.830
ENSGAGP00000007531
Ig-like domain-containing protein.
   
 
0.830
ENSGAGP00000009103
Ig-like domain-containing protein.
   
 
0.830
ENSGAGP00000011778
Ig-like domain-containing protein.
   
 
0.830
ENSGAGP00000024691
Ig-like domain-containing protein.
   
 
0.830
ENSGAGP00000003904
MHC_II_beta domain-containing protein.
   
  0.763
ENSGAGP00000003895
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.734
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.