STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000006532ANK_REP_REGION domain-containing protein. (1418 aa)    
Predicted Functional Partners:
C12orf57
Chromosome 12 open reading frame 57.
    
   0.913
PPP6C
Serine/threonine-protein phosphatase.
   
 0.797
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.645
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
    
 0.645
ENSGAGP00000009315
Uncharacterized protein.
    
 0.645
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.645
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.640
IFT81
Intraflagellar transport 81.
    
 0.635
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.619
ACP5
Tartrate-resistant acid phosphatase type 5.
   
 0.619
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.