STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETDB1SET domain bifurcated histone lysine methyltransferase 1. (1293 aa)    
Predicted Functional Partners:
ATF7IP
Activating transcription factor 7 interacting protein.
   
 0.977
ENSGAGP00000032998
Fibronectin type-III domain-containing protein.
   
 0.951
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
0.925
EHMT1
Euchromatic histone lysine methyltransferase 1.
   
0.911
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.891
ENSGAGP00000003124
Uncharacterized protein.
    
0.875
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.874
PRDM2
PR/SET domain 2.
    
 0.873
KMT2E
Lysine methyltransferase 2E.
    
 0.860
KMT5B
Lysine methyltransferase 5B.
     
 0.859
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.