STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTFMTMitochondrial methionyl-tRNA formyltransferase. (375 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
  
 
 0.959
ENSGAGP00000002131
ATP-grasp domain-containing protein.
    
 0.951
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
 0.951
PDF
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
  
 0.947
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.943
ENSGAGP00000012007
Uncharacterized protein.
  
 
 0.938
ENSGAGP00000011865
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.932
MTHFD2
Uncharacterized protein.
  
 
 0.932
ENSGAGP00000036512
THF_DHG_CYH domain-containing protein.
  
 
 0.932
MTHFR
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.929
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.