STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHOJRas homolog family member J. (214 aa)    
Predicted Functional Partners:
ENSGAGP00000010605
EH domain-containing protein.
    
 0.997
ITSN2
Intersectin 2.
    
 0.997
ITSN1
Intersectin 1.
    
 0.962
ENSGAGP00000013961
Uncharacterized protein.
   
 0.900
ENSGAGP00000013963
Ig-like domain-containing protein.
   
 0.900
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.893
ENSGAGP00000011428
SAM domain-containing protein.
   
 0.855
ENSGAGP00000013190
FERM_f0 domain-containing protein.
   
 0.855
SHANK3
SH3 and multiple ankyrin repeat domains 3.
   
 0.855
ENSGAGP00000021558
PDZ domain-containing protein.
   
 0.855
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.