STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOA2Apolipoprotein A2. (101 aa)    
Predicted Functional Partners:
ENSGAGP00000013819
Uncharacterized protein.
   
 
 0.978
APOA1
Apolipoprotein A1.
   
 0.974
ENSGAGP00000001854
Uncharacterized protein.
   
 0.966
APOH
Apolipoprotein H.
   
 
 0.940
ENSGAGP00000000754
Vitellogenin domain-containing protein.
   
 0.934
ENSGAGP00000030507
ApoB100_C domain-containing protein.
   
 0.934
AHSG
Alpha 2-HS glycoprotein.
   
 
 0.921
ENSGAGP00000035807
Uncharacterized protein.
   
 0.910
AMBP
Alpha-1-microglobulin/bikunin precursor.
   
  
 0.903
APOE
Apolipoprotein E.
    
 0.897
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.