Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATL1 | ENSGAGP00000035519 | ENSGAGP00000008536 | ENSGAGP00000035519 | Atlastin GTPase 1. | UEV domain-containing protein. | 0.622 |
ATL1 | FIGN | ENSGAGP00000008536 | ENSGAGP00000019881 | Atlastin GTPase 1. | Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family. | 0.400 |
ATL1 | FIGNL1 | ENSGAGP00000008536 | ENSGAGP00000015466 | Atlastin GTPase 1. | Fidgetin like 1; Belongs to the AAA ATPase family. | 0.400 |
ATL1 | FIGNL2 | ENSGAGP00000008536 | ENSGAGP00000024522 | Atlastin GTPase 1. | Fidgetin like 2; Belongs to the AAA ATPase family. | 0.400 |
ATL1 | REEP1 | ENSGAGP00000008536 | ENSGAGP00000027638 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.466 |
ATL1 | SPAST | ENSGAGP00000008536 | ENSGAGP00000033895 | Atlastin GTPase 1. | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | 0.400 |
ENSGAGP00000035519 | ATL1 | ENSGAGP00000035519 | ENSGAGP00000008536 | UEV domain-containing protein. | Atlastin GTPase 1. | 0.622 |
FIGN | ATL1 | ENSGAGP00000019881 | ENSGAGP00000008536 | Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family. | Atlastin GTPase 1. | 0.400 |
FIGNL1 | ATL1 | ENSGAGP00000015466 | ENSGAGP00000008536 | Fidgetin like 1; Belongs to the AAA ATPase family. | Atlastin GTPase 1. | 0.400 |
FIGNL2 | ATL1 | ENSGAGP00000024522 | ENSGAGP00000008536 | Fidgetin like 2; Belongs to the AAA ATPase family. | Atlastin GTPase 1. | 0.400 |
REEP1 | ATL1 | ENSGAGP00000027638 | ENSGAGP00000008536 | Receptor expression-enhancing protein. | Atlastin GTPase 1. | 0.466 |
SPAST | ATL1 | ENSGAGP00000033895 | ENSGAGP00000008536 | Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] | Atlastin GTPase 1. | 0.400 |