STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBSL1Obscurin like 1. (1896 aa)    
Predicted Functional Partners:
ENSGAGP00000013961
Uncharacterized protein.
 
 
0.795
ENSGAGP00000013963
Ig-like domain-containing protein.
   
 0.795
WDR18
WD repeat domain 18.
   
 0.778
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.703
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.668
MYL1
Myosin light chain 1.
   
 0.646
ENSGAGP00000007132
Uncharacterized protein.
   
 0.642
ENSGAGP00000020715
Ipi1_N domain-containing protein.
   
 0.642
CALML6
Calmodulin like 6.
    
 0.626
ENSGAGP00000034376
Uncharacterized protein.
   
 0.626
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.