STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS3MTArsenite methyltransferase. (346 aa)    
Predicted Functional Partners:
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.955
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.952
ENSGAGP00000005253
Uncharacterized protein.
   
 0.909
ENSGAGP00000021872
Uncharacterized protein.
   
 0.909
SC5D
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.905
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.890
MSMO1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.887
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.887
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.887
ENSGAGP00000002694
Tr-type G domain-containing protein.
  
 0.867
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.