STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSPBAP1HSPB1 associated protein 1. (397 aa)    
Predicted Functional Partners:
HSPB1
Heat shock protein family B (small) member 1; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.660
NPAS1
Neuronal PAS domain protein 1.
    
 0.656
HIF3A
Hypoxia inducible factor 3 subunit alpha.
    
 0.656
NPAS3
Neuronal PAS domain protein 3.
    
 0.656
ENSGAGP00000029258
BHLH domain-containing protein.
    
 0.656
EPAS1
Endothelial PAS domain protein 1.
    
 0.656
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
   0.593
TRPA1
Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
   0.593
ENSGAGP00000028502
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.590
JMJD4
Jumonji domain containing 4.
      
 0.556
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.