STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECTIN4Nectin cell adhesion molecule 4. (524 aa)    
Predicted Functional Partners:
AFDN
Afadin, adherens junction formation factor.
    
 0.923
NECTIN1
Nectin cell adhesion molecule 1.
    
0.914
ENSGAGP00000009473
Uncharacterized protein.
    
 
0.821
ENSGAGP00000019495
Ig-like domain-containing protein.
    
 
0.821
ENSGAGP00000031849
Uncharacterized protein.
    
 
0.821
NECTIN2
Nectin cell adhesion molecule 2.
    
 
0.818
PARD3
Par-3 family cell polarity regulator.
    
  0.809
ENSGAGP00000027248
Par3_HAL_N_term domain-containing protein.
    
  0.802
PARD3B
Par-3 family cell polarity regulator beta.
    
  0.718
ENSGAGP00000030099
Par3_HAL_N_term domain-containing protein.
    
  0.718
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.