STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000010873annotation not available (318 aa)    
Predicted Functional Partners:
ENSGAGP00000035818
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.736
ENSGAGP00000036465
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.736
ENSGAGP00000017353
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.688
RAG2
Recombination activating 2.
   
 0.667
BARD1
BRCA1 associated RING domain 1.
    
 0.662
PLA2G4A
Phospholipase A2.
     
 0.613
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.597
RPL21
Uncharacterized protein.
   
   0.593
ENSGAGP00000012662
Uncharacterized protein.
    
 0.587
RPL13A
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
   0.543
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.