STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRID1Glutamate ionotropic receptor delta type subunit 1. (789 aa)    
Predicted Functional Partners:
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
0.723
ENSGAGP00000028066
Uncharacterized protein.
    
 0.711
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
0.693
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
0.657
GRIN2D
Glutamate ionotropic receptor NMDA type subunit 2D.
    
0.621
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
    
0.621
ENSGAGP00000030799
Uncharacterized protein.
 
 
 0.600
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
   
0.576
GRIN3B
Glutamate ionotropic receptor NMDA type subunit 3B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.560
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
0.548
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.